Go to the newly created folder (which is still empty). Then type to the Konsole:

  peaksearch.py -n ../XXX/YYY -f 0 -l 111 -d ../XXX/XXgrainm20000.edf -t &&&

where XXX is a space holder for the directory and YYY is a space holder for the stem of the edf image files (everything before the numbers).

&&& is a space holder for the intensity threshold. You can also add more than one threshold by exceeding the code by another -t &&& -t &&& -t &&& …, depending on how many thresholds you want to test.

From now on, we call the newly created files processed data.

Open ImageD11 by going to the folder where the processed data is stored. Now open the program by typing the following to the Konsole:

  ImageD11_gui.py

The program should open. In ImageD11 go to Transformation, then Load filtered peaks and choose the .flt file you would like to see (You automatically should be in the right folder.).

Then go to Transformation and plot y/z. You should see a 2D diffraction image of all the spots which passed the threshold.