Go to the newly created folder (which is still empty). Then type to the Konsole:

  peaksearch.py -n ../XXX/YYY -f 0 -l 111 -d ../XXX/XXgrainm20000.edf -t &&&

where XXX is a space holder for the directory and YYY is a space holder for the stem of the edf image files (everything before the numbers).

&&& is a space holder for the intensity threshold. You can also add more than one threshold by exceeding the code by another -t &&& -t &&& -t &&& …, depending on how many thresholds you want to test.

From now on, we call the newly created files processed data.

Open ImageD11 by going to the folder where the processed data is stored. Now open the program by typing the following to the Konsole:

  ImageD11_gui.py

The program should open. In ImageD11 go to Transformation, then Load filtered peaks and choose the .flt file you would like to see (You automatically should be in the right folder.).

Then go to Transformation and plot y/z. You should see a 2D diffraction image of all the spots which passed the threshold. From now on, we call this image diffraction plot. You should remember, which file you opened, because ImageD11 doesn't show this anywhere.

ImageD11 can show only one diffraction plot at once. If you want to compare two (or more) diffraction plots, you can either save the plots (as .png file) or open a new ImageD11 in a new tab of the Konsole.