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processing:workflow_dac_data
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processing:workflow_dac_data [2019/02/15 15:41] smerkel |
processing:workflow_dac_data [2020/03/25 09:36] (current) matthias [Workflow outline] |
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| Here is a simple outline of what you should do: | Here is a simple outline of what you should do: | ||
| - Calibrate your experiment. This should be done with either [[software:dioptas|Dioptas]] or [[software:fit2d|Fit2D]]. Beam centers and detector distances you find in Dioptas or Fit2D will be used at a later stage of the processing. | - Calibrate your experiment. This should be done with either [[software:dioptas|Dioptas]] or [[software:fit2d|Fit2D]]. Beam centers and detector distances you find in Dioptas or Fit2D will be used at a later stage of the processing. | ||
| + | - Understand the [[dac_experiments:geometry|concept of an O-Matrix]] and figure out your own. | ||
| - We often also calibrate [[software:Maud|Maud]] as this point. We will use it later to figure out the cell parameters of our sample. As you start using MAUD keep a note of the parameters you use to convert your tiff images into ESG. You will need to use exactly the same ones on your sample images later. | - We often also calibrate [[software:Maud|Maud]] as this point. We will use it later to figure out the cell parameters of our sample. As you start using MAUD keep a note of the parameters you use to convert your tiff images into ESG. You will need to use exactly the same ones on your sample images later. | ||
| - Later, for each P/T point you wish to study | - Later, for each P/T point you wish to study | ||
| - | * Identify images with double diffraction (where the single-crystal diffraction from the diamond anvil acts as a secondary source) with sufficient intensity to get mixed up with data, delete them, and replace them with either the average of the two surrounding images or create an empty image, | + | * [[processing:remove_bad_images|Remove bad images]] and replace them with either the average of the two surrounding images or create an empty image, |
| * Calculate an average and a median image, | * Calculate an average and a median image, | ||
| * Use MAUD or Dioptas or anything else to identify your phases and their cell parameters. We often work on the average images to do so, | * Use MAUD or Dioptas or anything else to identify your phases and their cell parameters. We often work on the average images to do so, | ||
| * [[processing:clean-diamond-anvil-cell-data|Clean up your data]] for diamond diffraction spots, DAC shadows, etc | * [[processing:clean-diamond-anvil-cell-data|Clean up your data]] for diamond diffraction spots, DAC shadows, etc | ||
| * [[processing:search_for_peaks|Search for peaks]], | * [[processing:search_for_peaks|Search for peaks]], | ||
| - | * Calculate your G-Vectors, | + | * [[processing:compute_gvectors|Calculate your G-Vectors]], |
| - | * Index your grains with GrainSpotter! | + | * [[processing:indexing_with_grainspotter|Index your grains with GrainSpotter!]] |
| + | * [[processing:peakremoval|Treat side phases first (e.g. pressure medium, pressure marker, other phases)]] | ||
| + | * ... | ||
| + | |||
| + | {{:processing:general_data_processing_flow_chart_.png?600|Data processing flow chart}} | ||
processing/workflow_dac_data.1550245272.txt.gz · Last modified: 2019/02/18 10:11 (external edit)
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