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processing:indexing_with_grainspotter

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processing:indexing_with_grainspotter [2023/03/14 12:27]
smerkel
processing:indexing_with_grainspotter [2023/03/16 12:08]
smerkel
Line 78: Line 78:
 </​code>​ </​code>​
  
 +======Loops with GrainSpotter======
  
 +It can be efficients to run multiple loops of grainspotter indexings. The underlying concept is as follow
 +  * Step 1:
 +    * run grainspotter with a given set of specifications,​ remove all indexed peaks from the GVE file,
 +    * repeat the above operation X times,
 +    * this will provide a first set of grains, which should be the most reliable
 +  * Step 2:
 +    * Lower the tolerance, and repeat X loops of indexings, remove indexed peaks at each step
 +    * this will provide a second set of grains, which may have to be checked
 +  * Repeat steps above, lowering tolerances progressively in order to optimize the number of indexed grains, while making sure that all indexed grains make sense
 +  * Combined the results of all indexings into one main log file, with all indexed files from the loop.
 +
 +There are several TIMEleSS tools to help you with this process
 +  * [[processing:​remove-used-gve-updated|timelessClearGVEGrains]]
 +  * [[processing:​grainspotter-merge|Merge GrainSpotter output files]]
 +  * [[processing:​extracteulerangles|ExtractEulerAngles.py]]
processing/indexing_with_grainspotter.txt · Last modified: 2023/03/16 12:10 by smerkel